GLnexus
Scalable datastore for population genome sequencing, with on-demand joint genotyping
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include
diploid.h
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#ifndef GLNEXUS_DIPLOID_H
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#define GLNEXUS_DIPLOID_H
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#include <utility>
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namespace
diploid {
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int
genotypes(
int
n_allele);
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std::pair<int,int> gt_alleles(
int
n_allele,
int
gt);
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int
alleles_gt(
int
n_allele,
int
a1,
int
a2);
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namespace
trio {
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int
mendelian_inconsistencies(
int
n_allele,
int
gt_p1,
int
gt_p2,
int
gt_ch);
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}
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}
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#endif
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