GLnexus
Scalable datastore for population genome sequencing, with on-demand joint genotyping
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Public Member Functions | |
BCFBucketRange (int interval_len) | |
std::string | bucket_prefix (const range &rng) |
std::string | bucket_key (const std::string &prefix, const std::string &dataset) |
std::string | bucket_key (const range &rng, const std::string &dataset) |
Status | parse_key (const string &key, string &bucket, string &dataset) |
std::shared_ptr< BucketExtent > | scan (const range &query) |
range | bucket (bcf1_t *rec) |
Public Attributes | |
int | interval_len |
Static Public Attributes | |
static const size_t | PREFIX_LENGTH = 23 |