Class Hierarchy

This inheritance list is sorted roughly, but not completely, alphabetically:

[detail level 123]

CGLnexus::ActiveMetadata
CGLnexus::allele
CGLnexus::AlleleDepthHelper
CGLnexus::BCFBucketRange
▼CGLnexus::BCFData
CGLnexus::BCFKeyValueData
CGLnexus::BCFFileSink
CGLnexus::BCFKeyValueData_body
CGLnexus::BCFScanner
CGLnexus::BCFWriter
CGLnexus::MetadataCache::body
CGLnexus::Service::body
CGLnexus::BucketExtent
CGLnexus::discovered_allele_info
CGLnexus::genotyper_config
▼CGLnexus::KeyValue::Iterator	In-order iterator over records in a collection. Not thread-safe
CGLnexus::RocksKeyValue::Iterator
CGLnexus::KStringHash
CGLnexus::loss_stats
CGLnexus::LossTracker
▼CGLnexus::Metadata
CGLnexus::BCFKeyValueData
CGLnexus::MetadataCache
CGLnexus::minimized_allele_info
CGLnexus::one_call	A single allele call and metadata; diploid samples each have two calls
CGLnexus::LossTracker::orig_call
CGLnexus::range	Genomic range (chromosome id, begin coordinate, end coordinate)
▼CGLnexus::RangeBCFIterator	Iterate over BCF records within some range
CGLnexus::BCFBucketIterator
CGLnexus::DefaultRangeBCFIteratorImpl
▼CGLnexus::KeyValue::Reader	A DB snapshot providing consistent multiple reads if possible. Thread-safe
▼CGLnexus::KeyValue::DB
CGLnexus::RocksKeyValue::DB
CGLnexus::RocksKeyValue::Reader
CGLnexus::Residuals
CGLnexus::ResidualsFile
CGLnexus::Service
CGLnexus::StatsRangeQuery
CGLnexus::Status	Function status (return) codes
CGLnexus::unified_site
▼CGLnexus::KeyValue::WriteBatch
CGLnexus::RocksKeyValue::WriteBatch